TYO - BKI

RM 784 Find Cheap Flights from Tokyo to Kota Kinabalu – Compare and Save

1 adult
1 adult, Economy, 0 bags

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Everything you should know

Cheapest return flight
RM 1,556
Typical prices: RM 1,675-RM 2,415
China Southern
Wed 7/3Wed 14/3
NRT - BKI • 1 stop
Cheapest one-way flight
RM 931
Typical prices: RM 824-RM 1,337
Multiple Airlines
Wed 7/3
NRT - BKI • 1 stop
Direct flights
Not available
There are currently no direct flights between Tokyo and Kota Kinabalu. You'll need to take a connecting flight to reach the destination.
Insights
Insights
Top routes
NRT - BKI
Cheapest • 1% average savings
HND - BKI
Most popular
Insights
Insights
When to travel
November
Cheapest • 51% price drop
March
Most popular
Good to know
+1
Good to know
+1
Top stopover airports
Shanghai Pu Dong (PVG)
Cheapest • Avg RM 1,243 (return)
Taipei City Taiwan Taoyuan Intl (TPE)
Shortest trip • 10h 04m (one-way)
Insights
Insights
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We hope you enjoy your trip to Kota Kinabalu!
Flight Deals
Booking Insights
Flight Deals

Cheap Flights from Tokyo to Kota Kinabalu (TYO-BKI)

 
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent return flight deals from Tokyo to Kota Kinabalu

Wed, 10 Mar - Sun, 14 Mar
China Southern Logo
14:20 - 00:30NRT  Tokyo Narita-BKI Kota Kinabalu
11h 10m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 13:15BKI  Kota Kinabalu-NRT Tokyo Narita
10h 30m1 stop Guangzhou Baiyun
RM 1,556China Southern
Mon, 8 Mar - Sun, 14 Mar
China Southern Logo
14:20 - 18:00NRT  Tokyo Narita-BKI Kota Kinabalu
28h 40m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 13:15BKI  Kota Kinabalu-NRT Tokyo Narita
10h 30m1 stop Guangzhou Baiyun
RM 1,556China Southern
Sun, 7 Mar - Sun, 14 Mar
China Southern Logo
14:20 - 18:00NRT  Tokyo Narita-BKI Kota Kinabalu
28h 40m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 13:15BKI  Kota Kinabalu-NRT Tokyo Narita
10h 30m1 stop Guangzhou Baiyun
RM 1,556China Southern
Sun, 6 Dec - Sat, 12 Dec
HK Express Logo
06:35 - 00:35HND  Tokyo Haneda-BKI Kota Kinabalu
19h 00m1 stop Hong Kong Intl
HK Express Logo
01:30 - 00:45BKI  Kota Kinabalu-HND Tokyo Haneda
22h 15m1 stop Hong Kong Intl
RM 1,637HK Express
Sun, 6 Dec - Sat, 12 Dec
HK Express Logo
15:25 - 00:35NRT  Tokyo Narita-BKI Kota Kinabalu
10h 10m1 stop Hong Kong Intl
HK Express Logo
01:30 - 19:05BKI  Kota Kinabalu-NRT Tokyo Narita
16h 35m1 stop Hong Kong Intl
RM 1,645HK Express
Wed, 10 Mar - Fri, 12 Mar
China Southern Logo
15:05 - 00:30HND  Tokyo Haneda-BKI Kota Kinabalu
10h 25m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 20:00BKI  Kota Kinabalu-HND Tokyo Haneda
17h 15m1 stop Guangzhou Baiyun
RM 1,703China Southern
Mon, 8 Mar - Thu, 11 Mar
China Southern Logo
10:45 - 18:00HND  Tokyo Haneda-BKI Kota Kinabalu
32h 15m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 20:00BKI  Kota Kinabalu-HND Tokyo Haneda
17h 15m1 stop Guangzhou Baiyun
RM 1,739China Southern
Mon, 8 Mar - Mon, 15 Mar
China Southern Logo
15:05 - 00:30HND  Tokyo Haneda-BKI Kota Kinabalu
10h 25m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 20:00BKI  Kota Kinabalu-HND Tokyo Haneda
17h 15m1 stop Guangzhou Baiyun
RM 1,739China Southern
Sun, 7 Mar - Mon, 15 Mar
China Southern Logo
10:45 - 18:00HND  Tokyo Haneda-BKI Kota Kinabalu
32h 15m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 20:00BKI  Kota Kinabalu-HND Tokyo Haneda
17h 15m1 stop Guangzhou Baiyun
RM 1,739China Southern
Wed, 10 Mar - Mon, 15 Mar
China Southern Logo
10:45 - 00:30HND  Tokyo Haneda-BKI Kota Kinabalu
14h 45m1 stop Guangzhou Baiyun
China Southern Logo
01:45 - 20:00BKI  Kota Kinabalu-HND Tokyo Haneda
17h 15m1 stop Guangzhou Baiyun
RM 1,739China Southern
Booking Insights

Price, demand, and travel trends for Tokyo to Kota Kinabalu flights

Use KAYAK data on prices, travel dates, airlines, and seasonal trends to compare options and book flights with more confidence.

How much is a return flight from Tokyo to Kota Kinabalu?

Return flights from Tokyo to Kota Kinabalu typically range from RM 1,675 to RM 2,415. The lowest price found in the past 5 days was RM 1,556 on China Southern.

What is the cheapest Tokyo to Kota Kinabalu flight route?

There's little price difference between Tokyo to Kota Kinabalu routes. They average around RM 2,249 return, based on KAYAK data over the past 12 months.

What's the cheapest day of the week to fly from Tokyo to Kota Kinabalu?

Based on deals KAYAK users found in the last 12 months, Monday is the cheapest day of the week to fly from Tokyo to Kota Kinabalu. It's 32% cheaper than the average day, while Saturday is the most expensive, with prices 49% higher.

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Key details for Tokyo to Kota Kinabalu flights

Low season

May

Cheapest flight

RM 931
Beat the crowds with an average 77% drop in travellers.
The most popular month to fly with an average 37% increase in travellers.
One-way flight from Tokyo Narita Airport to Kota Kinabalu

When to book flights from Tokyo to Kota Kinabalu

Are your dates flexible? Find out the best times to travel from Tokyo to Kota Kinabalu based on our flight data from the last year. Discover the cheapest month and even day to fly.
Estimated return price

Your Tokyo to Kota Kinabalu flight questions, answered

Find helpful answers about this route, including flight times, airports, airlines, and booking tips.

  • Which cabin classes can I book on flights from Tokyo to Kota Kinabalu?

    Only Economy class is available on flights from Tokyo to Kota Kinabalu.

  • How long is a flight from Tokyo to Kota Kinabalu?

    A direct flight from Tokyo to Kota Kinabalu takes 00m, covering 6,595 km.

  • Do I need a passport to fly from Tokyo to Kota Kinabalu?

    Yes, a valid passport is required for this international route. Many destinations require at least six months of validity beyond your travel dates. Check your passport expiry well before booking.

  • How much should I expect to pay for a Tokyo to Kota Kinabalu flight?

    Return flights from Tokyo to Kota Kinabalu range from RM 1,675 to RM 2,415, with an average of RM 2,219 over the past 12 months. Anything below RM 1,675 counts as a good deal.

  • Have flight prices from Tokyo to Kota Kinabalu changed much recently?

    Yes. Based on fares seen in the past 5 days, return flight prices on this route showed a wide range, from about RM 1,556 to RM 9,739. That means the highest observed fare was about 6x higher than the lowest one.

  • How are flight prices from Tokyo to Kota Kinabalu looking right now?

    One-way fares from Tokyo to Kota Kinabalu are currently lower than usual. Average one-way flight prices are about RM 959, which is 5% below the typical average for this route.

  • Which car hire options are available at Kota Kinabalu Airport (BKI)?

    Kota Kinabalu Airport (BKI) hosts 5 major car rental companies, with daily rates starting from around RM 70 for economy cars. Top options include:

    • keddy by Europcar
    • GREEN MOTION
    • Europcar
    • MKAZ
    • Suria Car Rental

  • Which airports can I use when flying from Tokyo to Kota Kinabalu?

    Flights from Tokyo to Kota Kinabalu may depart from several airports in Tokyo area, including Tokyo Haneda (HND) and Tokyo Narita (NRT). Flights usually arrive at Kota Kinabalu (BKI).

  • Which airports do connecting flights from Tokyo to Kota Kinabalu pass through?

    One-stop flights from Tokyo to Kota Kinabalu most commonly connect through:

    • Incheon Intl (ICN) – 37% of one-stop connections
    • Kuala Lumpur Intl (KUL) – 24% of one-stop connections
    • Hong Kong Intl (HKG) – 22% of one-stop connections
    • Shanghai Pu Dong (PVG) – 12% of one-stop connections

  • Can I save money by using flexible dates for flights from Tokyo to Kota Kinabalu?

    Yes. Flexible dates can save you up to 55% on flights from Tokyo to Kota Kinabalu. Monday is the cheapest departure day at RM 1,511 return on average, while Saturday is the most expensive at RM 3,323, a difference of RM 1,813.

    KAYAK's flexible dates feature shows options up to three days before and after your selected dates, making it easier to compare nearby fares.

  • How much time can I save by choosing a different stopover airport from Tokyo to Kota Kinabalu?

    Flying via Taipei City Taiwan Taoyuan Intl (TPE) gives the shortest average 1-stop total travel time of 10h 04m, compared to 10h 44m via Incheon Intl (ICN) and 11h 58m via Shanghai Pu Dong (PVG).

  • What is the time difference between Tokyo and Kota Kinabalu?

    Kota Kinabalu is 1 hour behind Tokyo (Malaysia Time vs Japan Time). Plan for the time shift when scheduling connections or first-day activities.

Your guide to booking Tokyo to Kota Kinabalu flights

Get tips on when to book, when to fly, and what to know before your trip.
  • If your dates are flexible, aim for a Monday departure and avoid flying on Saturday. On this route, Monday flights average RM 1,511, which is about RM 1,813 less than Saturday fares (55% savings) based on the last 12 months.
  • If you can choose when to travel, plan your Tokyo to Kota Kinabalu trip for November. Fares historically average RM 1,094 return in that month – typically RM 2,229 less than the most expensive month, which is September (based on the last 12 months).
  • If you're arriving late at night and need somewhere to stay, check out these hotels close to Kota Kinabalu Airport.

    • Lintas Platinum Hotel
    • Goldenhill Hotel

More options for your flight from Tokyo to Kota Kinabalu

Complete your trip to Kota Kinabalu with a hotel stay or car hire

Car rentals in Kota Kinabalu
Hotels in Kota Kinabalu